News

Unipept 2.1 includes these major updates:

• A fresh coat of paint
• Lots of bug fixes and performance improvements

Check the release notes for a full list of changes.

Unipept 2.1 includes these updates:

added

A fresh coat of paint for most of the pages

added

Support for high resolution (retina) displays in all images and icons

added

An option to download the data in the unique peptide graph as a Microsoft Excel compatible CSV file

added

An option to download the sunburst and unique peptide graph as an SVG file

improved

Rewrite of all file download code to improve the user experience

improved

Smoother dragging in the unique peptide graph

improved

Custom taxonomy tree implementation on the multi-peptide result page

fixed

A bug where the download button stayed disabled after downloading the results on the multi-peptide page

fixed

A bug with full screen mode on the unique peptide page

fixed

A bug where dragging a node triggered a popover in some browsers

updated

Bootstrap to 3.0.3

updated

D3.js to 3.3.10

Unipept 2.0 includes these major updates:

• Added the Unique Peptide Finder application
• Updated to Uniprot 2013.04

Check the release notes for a full list of changes.

Unipept 2.0 includes these updates:

added

The Unique Peptide Finder

added

GO and EC cross references to database

added

Search settings to the batch run script

added

A timeout before filtering the tree on the multi result page

added

Invalidation "metagenome" NCBI taxa

improved

Tweaked the lineage invalidation

improved

Code spring cleaning and rewrite of backend scripts

improved

Switch from JS animations to CSS animations where possible

fixed

A bug when attempting to load a pride dataset without entering an id

fixed

A bug where only 1 number was shown in the tree on the multi result page

fixed

A bug where the sizes of the slices in the sunburst were not correct

fixed

A bug where downloading results from results page didn't behave as expected

updated

Uniprot to 2013.04

updated

Bootstrap to 2.3.1

updated

Rails to 3.2.13

updated

D3.js to 3.3.8

updated

html2canvas to 2013.04

New features in this release:

• Added support for PRIDE datasets
• Multi-peptide results can now be downloaded from the results page

Some major features in this release:

• Added tryptic peptides with length between 5 and 8 to the database
• Added support for missed cleavages

update 1.4.1: fixed an issue where not filtering duplicate peptides didn't work.
update 1.4.2: added references to the J. Proteome Res. article.
update 1.4.3: security update.

Some important new features in this release:

• Switched to twitter bootstrap for the user interface
• Added full screen visualisations for supported browsers
• Visualisations can now be saved as images
• Updated to UniProt release 2012_07

The focus of Unipept version 1.2 was on performance improvements. This results in massive improvements in page load time due to optimized queries and faster JSON generation.
update 1.2.1: fixed an issue where the checkbox of single peptide analysis didn't work.

Unipept version 1.1 is now available. Notable new features are:

• new website design
• this news box
• performance improvement of the sunburst visualization in Firefox