Unipept

Unipept 3.1 changelog

Unipept 3.1 consists of 84 commits and 75 changed files with 1,158 additions and 921 deletions. This includes these updates:

added: UniProt proteomes as data source for the peptidome analysis instead of assemblies
added: Type strains and reference proteomes markers in the proteome selector
improved: The loading speed of proteomes by 3 to 5 times
improved: The unique peptidome calculation speed of proteomes by 5 to 25 times
improved: The sequence download speed of peptidomes by 3 to 5 times
improved: The taxon invalidation rules for viruses
fixed: an issue where virus names were abbreviated in the peptidome analysis where they shouldn't
fixed: a bug where the API could return an error 500 in an obscure case
fixed: a bug where the invalid input would result in an error 500 when converting peptides
fixed: a bug where the TPA would crash for non-ascii input
updated: rails to 4.2.5

3.1.1 - 2016-02-01

added: Our Bioinformatics publication
improved: The peptidome clustering to improve speed up to 30 times
fixed: An issue with the "Download Data" button of the unique peptide finder
updated: UniProt to 2016.01

3.1.2 - 2016-02-23

3.1.3 - 2016-06-08