Unipept 2.5 changelog

posted on 2015-02-25

Unipept 2.5 consists of 191 commits and 151 changed files with 3,995 additions and 15,187 deletions. This includes these updates:
added
A new full screen mode to the Metaproteomics analysis results page
added
Breadcrumb navigation to the treemap
added
Breadcrumb navigation to the sunburst
added
The option to shift+click a node in the treeview to expand all its children
added
A highlight effect when hovering over sunburst slices
added
insdc and refseq cross references to the pept2prot api
added
Incremental PRIDE dataset loading
added
A new page with an overview of our publications
improved
The responsiveness of the Metaproteomics Analysis (full rewrite)
improved
The treemap visualisation (own implementation using D3)
improved
The sunburst image export by excluding the faded slices from the exported image
improved
The Tryptic Peptide Analysis tree by using the number of actual hits for the node size and include tooltips
fixed
An issue where removing a genome while a genome was being removed, crashed the unique peptide finder
fixed
An issue where negative taxon id's were returned by the API
fixed
An issue with overlapping nodes in the new tree visualisation
fixed
An issue with a "new version"-message appearing in the CLI
fixed
An issue where a serif font was used for the image export of clustered genomes
fixed
An issue with the top navigation being on 2 lines when helvetica nor arial were installed
updated
rails to 4.1.8
updated
D3.js to 3.5.3
updated
bootstrap to 3.3.2
This is the first unipept version to achieve a 100% test coverage.

Unipept 2.5.1
fixed
An issue where adding "my genomes" failed
Unipept 2.5.2
added
GO terms to the peptide page
updated
UniprotKB to 2015_02