Unipept CLI Case Studies

This page explores several uses of the Unipept command line tools.

Taxonomic analysis of a tryptic peptide

This case study describes how the Unipept command line tools can be used for the taxonomic analysis of a single tryptic peptide. All steps, from installation till the end result are covered.

Taxonomic analysis of a metaproteomics dataset

This case study describes how the Unipept command line tools can be used for the taxonomic analysis of a metaproteomics dataset.